VU                                                                 nat-ster
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My lab moved to the Zernike Institute

at the Rijksuniversiteit Groningen


       for a more recent list of publications click here




Publications

33)   O. Kononova, J. Snijder, Y. Kholodov, K. A. Marx, G. J. L. Wuite, W. H. Roos, V. Barsegov
        Fluctuating Nonlinear Spring Model of Mechanical Deformation of Biological Particles
        PLoS Computat. Biol., accepted

32)   G. Farge, M. Mehmedovic, M. Baclayon, S. van den Wildenberg, W. H. Roos, C. Gustafsson, G. J. L. Wuite, M. Falkenberg
        In vitro reconstituted nucleoids can block mitochondrial DNA replication and transcription
        Cell Reports, 2014, Vol. 8, 66-74

31)   D. Vorselen, W. H. Roos, F. C. MacKintosh, G. J. L. Wuite, J. J. W. A. van Loon
        The role of the cytoskeleton in sensing changes in gravity by non-specialized cells
        FASEB J.2014, Vol. 28, 536-547

30)   D. Luque, A. de la Escosura, J. Snijder, M. Brasch, R. Rose, M. Koay, J. Carrascosa, G. J. Wuite, W. H. Roos, A. J. Heck, J. Cornelissen, T. Torres, J. Castón
        Self-Assembly and Characterization of Small and Monodisperse Dye Nanospheres in a Protein Cage
        Chemical Science2014, Vol. 5, 575-581

29)   O. Kononova, J. Snijder, M. Brasch, J. Cornelissen, R. I. Dima, K. A. Marx, G. J. Wuite, W. H. Roos, V. Barsegov
        Structural Transitions and Energy Landscape for Cowpea Chlorotic Mottle Virus Capsid mechanics from nanomanipulation in vitro and in silico
         Biophys. J., 2013, Vol. 105, 1893-1903
                   See also New and Notable: Capsid deformations reveal complex mechano-chemistry

28)   J. Snijder, C. Uetrecht, R. Rose, R. Sanchez, G. Marti, J. Agirre, D. M. Guérin, G. J. Wuite, A. J. R. Heck, W. H. Roos
        Probing the biophysical interplay between a viral genome and its capsid
        Nature Chemistry, 2013, Vol. 5, 502-509
                   See also Nature Chemistry News and Views: Biophysical chemistry: Unravelling capsid transformations

27)   J. Snijder, V. S. Reddy, E. R. May, W. H. Roos, G. R. Nemerow, G. J. L. Wuite
        Integrin and defensin modulate the mechanical properties of adenovirus
        J. Virol., 2013, Vol. 87, 2756-2766
                   See also JVI Spotlight: Host Factors Involved in Uncoating Modulate Adenovirus Elasticity
                   Selected as illustration for the cover

26)   W. S. Klug, W. H. Roos, G. J. L. Wuite
        Unlocking internal pre-stress from protein nanoshells
        
Phys. Rev. Lett., 2012, Vol. 109, 168104
                   Spotlighted as a Physics synopsis: Protein Shells Take a Strength Test
                   Covered by NRC Handelsblad 27 Oct 2012: Virusomhulsel dankt zijn stevigheid aan zijn twintig hoekjes

25)   J. Snijder, I. L. Ivanovska, M. Baclayon, W. H. Roos, G. J. L. Wuite
        Probing the impact of loading rate on the mechanical properties of viral nanoparticles
        
Micron, 2012, Vol. 43, 1343-1350

24)   D. Heuveling, G. Visser, M. de Groot, J. F. de Boer, M. Baclayon, W. H. Roos, G. Wuite, C. Leemans, R. de Bree, G. A. M. S. van Dongen
        Nanocolloidal albumin-IRDye 800CW: a near-infrared fluorescent tracer with optimal retention in the sentinel lymph node
        
Eur. J. Nucl. Med. Mol. Imaging, 2012, Vol. 39, 1161-1168

23)   W. H. Roos, I. Gertsman, E. R. May, C. L. Brooks III, J. E. Johnson, G. J. L. Wuite
        Mechanics of bacteriophage maturation
        
Proc. Natl. Acad. Sci. U. S. A., 2012, Vol. 109, 2342-2347

22)   M. Baclayon, G. K. Shoemaker, C. Uetrecht, S. Crawford, M. Estes, B. Prasad, A. J. Heck, G. J. Wuite, W. H. Roos
        Pre-stress strenghtens the shell of Norwalk Virus Nanoparticles
        Nano Letters
2011, Vol. 11, 4865-4869

21)   D. Heuveling, G. Visser, M. Baclayon, W. H. Roos, G. J. Wuite, O. Hoekstra, C. Leemans, R. de Bree, G. A. M. S. van Dongen
        89Zr-Nanocolloidal Albumin–Based PET/CT Lymphoscintigraphy for Sentinel Node Detection in Head and Neck Cancer: Preclinical Results
        J. Nuclear Medicine, 2011, Vol. 52, 1580-1584

20)   A. Evilevitch, W. H. Roos, I. L. Ivanovska, M. Jeembaeva, B. Jönsson, G. J. L. Wuite
        Effects of salts on internal DNA pressure and mechanical properties of phage capsids
        J. Mol. Biology, 2011, Vol. 405, 18-23

19)   W. H. Roos, R. Bruinsma, G. J. L. Wuite
        Physical Virology
        Nature Physics, 2010, Vol. 6, 733-743
                See also the scientific blogs Small things considered and Curiosidades de la Microbiología

18)   M. Baclayon, G. J. L. Wuite, W. H. Roos
        Imaging and manipulation of single viruses by atomic force microscopy
        Soft Matter, 2010, Vol. 6, 5273-5285
                Selected as illustration for the cover: click here for the image

17)   W. H. Roos, M. M. Gibbons, A. Arkhipov, C. Uetrecht, N. Watts, P Wingfield, A. C. Steven, A. Heck, K. Schulten, W. Klug, G. J. L. Wuite
        Squeezing protein shells: how continuum elastic models, molecular dynamics simulations and experiments coalesce at the nanoscale
        Biophysical J., 2010, Vol. 99, 1175-1181
                Featuring as a Biophysical Journal Research Highlight

16)   G. K. Shoemaker, E. van Duijn, S. Crawford, C. Uetrecht, M. Baclayon, W. H. Roos, G. Wuite, M. Estes, B. Venkataram Prasad, A. J. R. Heck
        Norwalk virus assembly and stability monitored by mass spectrometry
        Mol. & Cell. Proteomics, 2010, Vol. 9, 1742-1751

15)   M. Baclayon, W. H. Roos, G. J. L. Wuite
        Sampling protein form and function with the atomic force microscope
        Mol. & Cell. Proteomics, 2010, Vol. 9, 1678-1688

14)   R. J. Kroeze, M. N. Helder, W. H. Roos, G. J. L. Wuite, R. A. Bank, T. H. Smit
        The effect of ethylene oxide, glow discharge and electron beam on the surface characteristics of poly(l-lactide-co-caprolactone) and the 
        corresponding cellular response of adipose stem cells

        Acta Biomaterialia, 2010, Vol. 6, 2060-2065

13)   A. Arkhipov, W. H. Roos, G. Wuite, K. Schulten
        Elucidating the mechanism behind irreversible deformation of viral capsids
        Biophys J., 2009, Vol. 97, 2061-2069

12)   W. H. Roos, K. Radtke, E. Kniesmeijer, H. Geertsema, B. Sodeik, G. J. L. Wuite
        Scaffold expulsion and genome packaging trigger stabilization of Herpes Simplex Virus capsids
        Proc. Natl. Acad. Sci. U. S. A., 2009, Vol. 106, 9673-9678
                See also Kennislink: VU kraakt mechanische structuur herpesvirus 
                See also Science Daily: Punching holes into herpes viruses

11)   T. Haraszti, S. Schulz, K. Uhrig, R. Kurre, W. Roos, C. Schmitz, J. Curtis, T. Maier, A. Clemen, J. Spatz
        Biomimetic models of the actin cortex
        Biophys. Rev. & Lett.2009, Vol. 4, 17-32

10)   W. H. Roos, G. J. L. Wuite
        Nanoindentation studies reveal material properties of viruses
        Adv. Mat., 2009, Vol. 21, 1187-1192

9)     W. H. Roos, O. Campas, F. Montel, G. Woehlke, J. P. Spatz , P. Bassereau, G. Cappello
        Dynamic kinesin-1 clustering on microtubules due to mutually attractive interactions
        Phys. Biol., 2008, Vol. 5, 046004

8)     C. Uetrecht, C. Versluis, N. R. Watts, W. H. Roos, G. J. Wuite, P. T. Wingfield, A. C. Steven, A. J. Heck
        High-resolution mass spectrometry of viral assemblies: Molecular composition and stability of dimorphic hepatitis B virus capsids
        Proc. Natl. Acad. Sci. U. S. A., 2008, Vol. 105, 9216-9220
                See also the science section of a major dutch daily: Volkskrant, 28 juli 2008

7)     W. H. Roos, I. L. Ivanovska, A. Evilevitch, G. J. L. Wuite
        Viral capsids: mechanical characteristics, genome packaging and delivery mechanisms
        Cell. Mol. Life Sci., 2007, Vol. 64, 1484-1497

6)     C. Mohrdieck, F. Dalmas, E. Arzt, R. Tharmann, M. M. A. E. Claessens, A. R. Bausch, C. Schmitz, J. Curtis, W. Roos, S. Schulz, K. Uhrig, A. Roth, 
        E. Sackmann, J. P. Spatz
        Biomimetic Models of the Actin Cytoskeleton
        Small, 2007, Vol. 3, 1015-1022

5)     V. K. Kodali, W. Roos, J. P. Spatz, J. E. Curtis
        Cell-assisted assembly of colloidal crystallites
        Soft Matter, 2007, Vol. 3, 337-348
                See also News: Cell structure made crystal clear? (2007) Chem Biol 2: B11

4)     W. Roos, J. Ulmer, S. Gräter, T. Surrey, J. P. Spatz
        Microtubule Gliding and Cross-Linked Microtubule Networks on Micropillar Interfaces
        Nano Letters, 2005, Vol. 5, 2630-2634

3)     C. Mohrdieck, A. Wanner, W. Roos, A. Roth, E. Sackmann, J.P. Spatz, E. Arzt
        A Theoretical Description of Elastic Pillar Substrates in Biophysical Experiments
        ChemPhysChem, 2005, Vol. 6, 1492-1498

2)     Wouter H. Roos, Alexander Roth, Johannes Konle, Hartmut Presting, Erich Sackmann, Joachim P. Spatz
        Freely Suspended Actin Cortex Models on Arrays of Microfabricated Pillars
        ChemPhysChem, 2003, Vol. 4, 872-877
                Selected as cover image illustration: click here for the image

1)     M. Haupt, A. Ladenburger, R. Sauer, K. Thonke, R. Glass, W. Roos, J. P. Spatz, H. Rauscher, S. Riethmüller, M. Möller
        Ultraviolet-emitting ZnO nanowhiskers prepared by a vapor transport process on prestructured surfaces with self-assembled polymers
        J. Applied Physics, 2003, Vol. 93, 6252-6257

Book chapters and other

R. Ayadi, W. H. Roos
Building an artificial actin cortex on microscopic pillar arrays
Book chapter in:
Methods in Cell Biology,
Building a Cell from its Component Parts, Vol. 128, Ed. J. Ross and W. F. Marshall, Elsevier, Amsterdam, 2015

M. G. M. van Rosmalen, W. H. Roos, G. J. L. Wuite
Material properties of Viral Nanocages explored by Atomic Force Microscopy
Book chapter in:
Methods in Molecular Biology,
Protein Cages, Vol. 1252, Ed. B. P. Orner, Springer, Berlin, 2015

Wouter Roos
Virussen onder Spanning
Ned. Tijdschr. v. Nat., 2013, 79e jaargang, p146-149

W. H. Roos
How to perform a nanoindentation experiment on a virus
Book chapter in:
Methods in Molecular Biology,
Single Molecule Analysis, Vol. 783, Eds E. Peterman & G. Wuite, Springer, Berlin, 2011

Joost Snijder, Gijs Wuite, Wouter Roos
Voelen en Vervormen van Virussen
Ned. Tijdschr. v. Nat., 2011, 77e jaargang, p70-74

W. H. Roos and G. J. L. Wuite
Mechanical Properties of viruses
Book chapter in:
Emerging Topics in Physical Virology, Eds. P. Stockley & R. Twarock, Imperial College Press, London, 2010

J.P. Spatz, S. Gräter, W. Roos, J. Ulmer
Oberfläche mit einer Anordnung einer Vielzahl säulenförmiger Erhebungen und deren Anwendungen
German patent application: DE10353697
Surface comprising an arrangement of a plurality of column shaped elevations, and uses thereof
International patent application: WO/2005/049479